Algorithms and equations utilized in poppr version 1.1.4
نویسندگان
چکیده
This vignette is focused on simply explaining the different algorithms utilized in calculations such as the index of association and different distance measures. Many of these are previously described in other papers and it would be prudent to cite them properly if they are used.
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Poppr: an R package for genetic analysis of populations with clonal or partially clonal reproduction
Many microbial, fungal, or oomcyete populations violate assumptions for population genetic analysis because these populations are clonal or partially clonal. Furthermore, few tools exist that are specifically designed for analyzing data from clonal populations, making analysis difficult and haphazard. We developed the R package poppr providing unique tools for analysis of data from admixed, clo...
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